VRISD Bioinformatics Internal Web Page

Local Tools Simple BLAT Query Batch BLAST to NCBI Ebi's Peptide Blaster FirstEF (First Exon Finder) MAFFT Multiple Alignments MEME and MAST 3.0.3 Primer3 YPPPPS   YAPPPPS Primer Express RepeatMasker TMPred Protein Translators Glimmer gene prediction Off-Site Tools EMBL-EBI's WU-Blast2 PCR Suite based on Primer3 Pasteur Institute (many useful tools) ch.EMBnet.org NCBI's Glimmer server

Gene Lookup Gene Lynx - gene-lookup tool MatchMiner - batch gene-lookup tool SOURCE - batch gene-lookup tool Genome Browsers Ensembl UCSC Genome Browser NCBI Map Viewer Misc. Documents MySQL Manual Linux Docs Perl Tutorial Core Services Genomics Core (Xiao-Qin): PowerPoint PDF Genomics Core (Yipeng): PowerPoint PDF Bioinformatics Core (Fred): PowerPoint PDF

Other Links External Bioinformatics Web Site Bioinformatics FTP files (read-only) System Administration Local Database Access: phpMyAdmin (read-only access) phpMyAdmin-2.5.5 phpMyAdmin-2.7.0-beta1 phpMyAdmin-2.11.1 phpPgAdmin